The deepTools ecosystem

Popular repositories

1. pyGenomeTracks Public

   python module to plot beautiful and highly customizable genome browser tracks

   Python 572 95

2. deepTools Public

   Tools to process and analyze deep sequencing data.

   Python 514 174

3. HiCExplorer Public

   HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

   Python 155 62

4. pyBigWig Public

   A python extension for quick access to bigWig and bigBed files

   C 151 39

5. HiCBrowser Public

   Simple web browser to visualize HiC tracks

   JavaScript 13 5

6. py2bit Public

   A python library for accessing 2bit files

   C 13 7