Snakemake

snakemake Public
This is the development home of the workflow management system Snakemake. For general information, see

HTML 1,399 MIT 339 593 43 Updated Jun 22, 2022
snakedeploy Public
deploy a snakemake pipeline directly from version control (under development)

Python 10 MPL-2.0 4 4 1 Updated Jun 22, 2022
snakemake-wrappers Public
This is the development home of the Snakemake wrapper repository, see

CAP CDS 138 113 36 13 Updated Jun 22, 2022
snakemake-workflow-catalog Public
A statically generated catalog of available Snakemake workflows

HTML 15 MIT 7 1 0 Updated Jun 22, 2022
snakemake-wrapper-utils Public
Utility functions and classes shared between Snakemake wrappers

Python 0 MIT 3 3 2 Updated Jun 16, 2022
snakefmt Public
The uncompromising Snakemake code formatter

Python 96 MIT 15 10 0 Updated Jun 13, 2022
snakemake-lang-vscode-plugin Public
Language support and snippets for Snakemake workflows (Snakefile, *.smk) for Visual Studio Code and Apache Theia.

Python 7 MIT 5 4 2 Updated May 16, 2022
snakemake-tutorial-data Public
Example data for the official Snakemake tutorial

Dockerfile 3 9 0 0 Updated Apr 23, 2022
snakemake.github.io Public
Snakemake homepage

HTML 2 MIT 1 0 0 Updated Mar 23, 2022
snakeface Public
The snakemake interface, currently works like a notebook (under development)

CSS 11 MPL-2.0 3 6 1 Updated Jan 14, 2022

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