openCOBRA

Community driven constraint-based reconstruction, analysis and modelling of biology

cobrapy Public
COBRApy is a package for constraint-based modeling of metabolic networks.

Jupyter Notebook 340 GPL-2.0 189 77 (3 issues need help) 13 Updated May 30, 2022
cobratoolbox Public
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

MATLAB 183 273 77 (1 issue needs help) 3 Updated May 25, 2022
COBRA.papers Public
Repository for scripts related to reproducing the results of an individual publication

MATLAB 6 6 0 0 Updated May 18, 2022
optlang Public
optlang - sympy based mathematical programming language

Python 187 Apache-2.0 41 31 2 Updated May 6, 2022
cobrapy-website Public

HTML 0 LGPL-3.0 4 0 1 Updated Apr 30, 2022
COBRA.tutorials Public
Repository of tutorials for The COBRA Toolbox

MATLAB 13 36 6 1 Updated Apr 27, 2022
ctf Public
Chemical table files for constraint-based modelling

0 GPL-3.0 3 1 0 Updated Apr 22, 2022
Medusa Public
Analysis of ensembles of metabolic network reconstructions

Python 16 MIT 8 25 11 Updated Apr 6, 2022
COBRA.jl Public
High-level, high-performance, constraint-based reconstruction and analysis in Julia

Julia 51 34 7 (1 issue needs help) 0 Updated Mar 18, 2022
MATLAB.devTools Public
MATLAB Development Tools

MATLAB 27 GPL-3.0 31 2 0 Updated Mar 3, 2022

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