Pinned

1. JEFworks-Lab/STdeconvolve Public

   Reference-free cell-type deconvolution of multi-cellular spatially resolved transcriptomics data

   R 49 6

2. JEFworks-Lab/veloviz Public

   RNA-velocity informed embeddings for visualizing cellular trajectories

   R 33 6

3. JEFworks-Lab/MERINGUE Public

   characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular densities

   R 37 3

4. JEFworks-Lab/HoneyBADGER Public

   HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data

   R 86 30

5. MUDAN Public

   Multi-sample Unified Discriminant ANalysis

   R 59 12

6. liger Public

   Lightweight Iterative Gene set Enrichment in R

   R 53 10