Broad Institute

Broad Institute of MIT and Harvard

covid19-testing Public
COVID-19 Diagnostic Processing Dashboard

HTML 20 MIT 6 2 1 Updated Oct 8, 2022
cms2-work Public
Gather in one place various repos and files related to CMS2.0 work.

Python 0 Apache-2.0 2 0 0 Updated Oct 7, 2022
gatk Public
Official code repository for GATK versions 4 and up

Java 1,300 511 1,086 (8 issues need help) 113 Updated Oct 7, 2022
gatk-sv Public
A structural variation pipeline for short-read sequencing

Python 95 BSD-3-Clause 49 61 14 Updated Oct 7, 2022
gnomad_qc Public

Jupyter Notebook 42 BSD-3-Clause 17 40 (1 issue needs help) 5 Updated Oct 7, 2022
gnomad_methods Public
Hail helper functions for the gnomAD project and Translational Genomics Group

Python 54 MIT 19 43 6 Updated Oct 7, 2022
sam Public
workbench identity and access management

Scala 31 BSD-3-Clause 10 2 42 Updated Oct 7, 2022
beehive Public
Beehive is a web UI for interacting with Sherlock, DSP DevOps's deployment source-of-truth service

TypeScript 0 BSD-3-Clause 0 0 0 Updated Oct 7, 2022
rawls Public
Rawls service for DSDE

Scala 22 BSD-3-Clause 3 0 36 Updated Oct 7, 2022
seqr Public
web-based analysis tool for rare disease genomics

Python 134 AGPL-3.0 73 67 5 Updated Oct 7, 2022

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