Theis Lab

Pinned

1. single-cell-tutorial Public

   Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

   Jupyter Notebook 948 368

2. scvelo Public

   RNA Velocity generalized through dynamical modeling

   Python 292 81

3. scarches Public

   Reference mapping for single-cell genomics

   Jupyter Notebook 219 36

4. cellrank Public

   CellRank for directed single-cell fate mapping

   Python 203 20

5. scgen Public

   Single cell perturbation prediction

   Python 176 43

6. single-cell-best-practices Public

   This project is work in progress! https://www.sc-best-practices.org

   Jupyter Notebook 61 5