Snakemake

Popular repositories

1. snakemake Public

   This is the development home of the workflow management system Snakemake. For general information, see

   HTML 1.6k 410

2. snakemake-wrappers Public

   This is the development home of the Snakemake wrapper repository, see

   CAP CDS 166 137

3. snakefmt Public

   The uncompromising Snakemake code formatter

   Python 109 20

4. snakemake-github-action Public

   A Github action for running a Snakemake workflow

   Shell 46 6

5. snakemake-workflow-catalog Public

   A statically generated catalog of available Snakemake workflows

   HTML 20 9

6. snakedeploy Public

   deploy a snakemake pipeline directly from version control (under development)

   Python 15 5