epidemiology

COVID-19 App

🦠 Huge collection of useful projects and resources for COVID-19 (2019 novel Coronavirus)

Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

Epidemic Modeling for Everyone

An easy-to-use PWA to monitor the user's wellness and learn about COVID-19.

Mathematical Modeling of Infectious Disease Dynamics

COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions

COVID-19 Hospital Impact Model for Epidemics

Unified COVID-19 Dataset

R Package for Analyzing John Snow's 1854 Cholera Map

Tutorial in Python targeted at Epidemiologists. Will discuss the basics of analysis in Python 3

Epidemiology analysis package

Algorithms from circuit theory to predict connectivity in heterogeneous landscapes

Public Available Code and Data to Reproduce Analyses in "Air pollution and COVID-19 mortality in the United States: Strengths and limitations of an ecological regression analysis."

Red Cross: Community-Based Surveillance

CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.

Race and ethnicity Imputation from Disease history with Deep LEarning

An agent-based epidemiology simulation framework built in Rust

Unpivoted and cleaned data sets on the COVID-19 pandemic

Source files for building the IDM EMOD disease transmission model.