Open data, open science, open and decentralised publishing. Data wrangling, molecular biology, genomics and bioinformatics. Research scientist. Novice human.
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Seqera Labs
- Montréal, QC, Canada
- http://robsyme.com
- @robsyme
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nf-repeatmasking Public
Nextflow workflow for automatic repeat detection, classification and masking
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polymer-region-selector Public
A widget that selects max and min bounds on a genomic sequence of a given length.
Dart 3
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224 contributions in the last year
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Activity overview
Contribution activity
March 2023
Created 2 commits in 1 repository
Created a pull request in nf-core/viralrecon that received 7 comments
Wrap params string in file method
When a custom kraken_db path is supplied, we were passing the string directly rather than wrapping it in a file() function call. This enables us to…
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7
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Opened 1 other pull request in 1 repository
nf-core/sarek
1
merged
Reviewed 3 pull requests in 3 repositories
nf-core/rnaseq
1 pull request
nf-core/viralrecon
1 pull request
nf-core/modules
1 pull request
Created an issue in nextflow-io/nextflow that received 3 comments
ConcurrentModificationException when using publishDir
Bug report A Seqera customer is intermittently seeing a java.util.ConcurrentModificationException that occurs during the publishing step of the FAS…
3
comments



