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@BorgwardtLab

Machine Learning and Computational Biology Lab

Pinned

  1. TOGL Public

    Topological Graph Neural Networks (ICLR 2022)

    Python 75 11

  2. SAT Public

    Official Pytorch code for Structure-Aware Transformer.

    Python 123 23

Repositories

  • proteinshake Public

    Protein structure datasets for machine learning.

    Python 13 BSD-3-Clause 1 46 0 Updated Mar 20, 2023
  • Python 2 GPL-3.0 0 6 0 Updated Mar 17, 2023
  • JointMDS Public

    Official implementation of Joint Multidimensional Scaling

    Python 8 BSD-3-Clause 1 0 0 Updated Mar 1, 2023
  • SAT Public

    Official Pytorch code for Structure-Aware Transformer.

    Python 123 BSD-3-Clause 23 0 0 Updated Feb 21, 2023
  • HOGImine Public

    Higher-order genetic interaction discovery with network-based biological priors.

    C++ 0 GPL-3.0 1 0 0 Updated Jan 20, 2023
  • DeepGWAS-GeneReps Public

    Set learning for obtaining gene representations for deep GWAS approaches

    Python 0 BSD-2-Clause 2 0 1 Updated Jan 12, 2023
  • LongCOVID Public

    Prediction of long COVID from proteomic and clinical data

    Python 0 0 0 0 Updated Jan 11, 2023
  • sc-autoencoding Public

    student internship of Simon Streib to reduce single cell data

    Python 2 1 0 12 Updated Dec 8, 2022
  • S3M Public

    A software package for statistically significant shapelet mining

    C++ 51 MIT 7 0 0 Updated Dec 2, 2022
  • shap Public

    A game theoretic approach to explain the output of any machine learning model.

    Jupyter Notebook 0 MIT 2,832 0 0 Updated Nov 27, 2022

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