Pinned

1. python-bioimage-analysis-tutorial Public

   The new and improved 2018 version of the EMBL Python BioImage Analysis Tutorial. Now finally in python 3!

   Jupyter Notebook 65 33

2. data-driven-analysis-lateralline Public

   This repository hosts the code for "An Image-Based Data-Driven Analysis of Cellular Architecture in a Developing Tissue" (Hartmann et al., 2020).

   Jupyter Notebook 3 2

3. chemokine_buffering_paper Public

   Code for python-based quantitative image and data analysis in "Dynamic buffering of extracellular chemokine enables robust adaptation during directed tissue migration" by Wong and colleagues.

   Jupyter Notebook 1 1

4. opto-notch-adaptation Public

   This repository hosts the code for "Desensitisation of Notch signalling through dynamic adaptation in the nucleus" (Viswanathan, Hartmann et al., 2021).

   Jupyter Notebook

5. EMBL-CodingClub Public

   This repo collects materials for the EMBL Coding Club.

   Jupyter Notebook 3 3

6. TrackTree Public

   Nice visualization of timecourse data obtained from tracking dividing/splitting objects.

   Jupyter Notebook 3 2