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@mims-harvard

Artificial Intelligence for Medicine and Science @ Harvard

Pinned

  1. TDC TDC Public

    Therapeutics Data Commons: Artificial Intelligence Foundation for Therapeutic Science

    Jupyter Notebook 890 161

  2. decagon decagon Public

    Graph convolutional neural network for multirelational link prediction

    Jupyter Notebook 431 142

  3. SubGNN SubGNN Public

    Subgraph Neural Networks (NeurIPS 2020)

    Python 176 31

  4. graphml-tutorials graphml-tutorials Public

    Tutorials for Machine Learning on Graphs

    Jupyter Notebook 185 53

  5. nimfa nimfa Public

    Nimfa: Nonnegative matrix factorization in Python

    Python 520 134

  6. TFC-pretraining TFC-pretraining Public

    Self-supervised contrastive learning for time series via time-frequency consistency

    Python 331 62

Repositories

Showing 10 of 37 repositories
  • mims-harvard.github.io Public

    Lab website

    HTML 0 0 0 0 Updated Jan 8, 2024
  • PrimeKG Public

    Precision Medicine Knowledge Graph (PrimeKG)

    Jupyter Notebook 271 MIT 61 2 0 Updated Jan 1, 2024
  • PINNACLE Public

    Contextualizing protein representations using deep learning on protein networks and single-cell data

    Python 18 MIT 3 2 0 Updated Dec 30, 2023
  • TDC Public

    Therapeutics Data Commons: Artificial Intelligence Foundation for Therapeutic Science

    Jupyter Notebook 890 MIT 161 34 (5 issues need help) 2 Updated Dec 20, 2023
  • PDGrapher Public

    Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks

    Python 7 MIT 3 0 0 Updated Dec 14, 2023
  • scCIPHER Public

    scCIPHER: Contextual deep learning on single-cell-enriched knowledge graphs in neurological disorders

    Jupyter Notebook 3 MIT 0 0 0 Updated Dec 13, 2023
  • TimeX Public

    Time series explainability via self-supervised model behavior consistency

    Python 13 0 1 0 Updated Oct 22, 2023
  • fastGNMF Public

    Fast graph-regularized matrix factorization

    Python 18 5 0 2 Updated Oct 3, 2023
  • scikit-fusion Public

    scikit-fusion: Data fusion via collective latent factor models

    Python 142 42 3 3 Updated Aug 10, 2023
  • GNNGuard Public

    Defending graph neural networks against adversarial attacks (NeurIPS 2020)

    Python 54 12 4 2 Updated Jul 6, 2023

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