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319 public repositories
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Accurate sample inference from amplicon data with single nucleotide resolution
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
Simple simulation of single-cell RNA sequencing data
Import and summarize transcript-level estimates for gene-level analysis
Contribute Packages to Bioconductor
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
Brings transcriptomics to the tidyverse
Base Classes and Functions for Mass Spectrometry and Proteomics
Curated and processed metagenomic data through ExperimentHub
A small project to add ggplot2 extensions
Clone of the Bioconductor repository for the SingleR package.
Development repository for the Bioconductor package 'mixOmics '
Provide R access to the NCI Genomic Data Commons portal.
Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
Bioconductor package for management of multi-assay data
Convert between AnnData and SingleCellExperiment
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Updated
Jan 10, 2021
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Python
Tools for manipulating annotated data matrices
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
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Updated
Feb 21, 2017
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HTML
Conversion between scRNA-seq objects
Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
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