An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

A comprehensive tutorial about GWAS and PRS

Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

Nanopore demultiplexing, QC and alignment pipeline

Manuscript describing ChronQC is now available online in Bioinformatics

Development of ExploreASL. Stable releases will be in the master branch. Use any other branch if you know what you're doing. If you want to contribute, please contact us at h.j.mutsaerts@amsterdamumc.nl. Development flow details can be found under the wiki tab. Code documentation can be found here: https://exploreasl.github.io/Documentation/site/index.html

Create a cromphensive report of DEG list coming from any analysis of RNAseq data

ATAC-seq processing pipeline

A web application for medical imaging quality assurance

Methylation array preprocessing.

A QC pipeline for SVs calls based on coverage and SNP calls

ChIP-seq analysis pipeline

Fast and easy visualization of fMRI data quality using carpet plots.

sacred.audio stage 1: analysis & reporting

Script for greedily remove related samples

Tool kit for exploratory data analysis and usage of SwipesForScience JSON data, complete with anonymous sample data.

CoalQC:Quality assessment of genomic datasets for Coalescent inferences

DiRoots - Connecting the dots!

See the main fork of this repository here >>> https://github.com/nf-core/nanoseq

Checking the status of the CTD Reference database (RDB)

L1：chipsea Cortex M0 MCU (CS32G020/CS32G021)

Quake II QC progs.dat

A workflow designed to clean fastq files for the SEACONNECT project

Implementation of qunatum clustering and hierarchical quantum clustering

This is the github repository for the Eichler lab Amazon Web Services (AWS) pipelines

ALM REST API Integration in ruby.

Base framework for creating semantic QC dashboards