htslib
Here are 32 public repositories matching this topic...
SeqAn's official repository.
-
Updated
May 14, 2023 - C++
cython + htslib == fast VCF and BCF processing
-
Updated
May 15, 2023 - Cython
nim wrapper for htslib for parsing genomics data files
-
Updated
Oct 5, 2022 - Nim
Graph realignment tools for structural variants
-
Updated
Dec 8, 2022 - C++
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
-
Updated
Dec 19, 2022 - C++
pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
-
Updated
Mar 3, 2017 - Python
BigWig manpulation tools using libBigWig and htslib
-
Updated
Mar 17, 2021 - C
Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts
-
Updated
Dec 11, 2020 - C
HTSlib bindings for Crystal
-
Updated
May 8, 2023 - Crystal
Process Illumina instrument data into SAM/BAM/CRAM files.
-
Updated
May 9, 2023 - C
Use simple expressions to filter a BAM/CRAM file
-
Updated
Oct 27, 2022 - C
high performance scripting VCF/BCF format :)
-
Updated
Mar 10, 2023 - C++
X11 related utilities for hts
-
Updated
May 10, 2019 - C++
VCF/Bcf genotypes filtering using htslib
-
Updated
Nov 18, 2020 - C
reference-free base quality score recalibration
-
Updated
Oct 16, 2020 - C++
Improve this page
Add a description, image, and links to the htslib topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the htslib topic, visit your repo's landing page and select "manage topics."