Here are
49 public repositories
matching this topic...
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
A comprehensive tutorial about GWAS and PRS
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
Updated
May 14, 2020
Python
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
Updated
Aug 19, 2020
Python
Nanopore demultiplexing, QC and alignment pipeline
Updated
Aug 27, 2020
Nextflow
Manuscript describing ChronQC is now available online in Bioinformatics
Updated
Jun 25, 2019
HTML
Create a cromphensive report of DEG list coming from any analysis of RNAseq data
A web application for medical imaging quality assurance
ATAC-seq processing pipeline
Updated
Jul 8, 2020
Shell
Methylation array preprocessing.
A QC pipeline for SVs calls based on coverage and SNP calls
ChIP-seq analysis pipeline
Updated
Mar 26, 2020
Shell
Developmental version of ExploreASL. Stable releases will be in the master branch. Use any other branch if you know what you're doing.
Updated
Sep 6, 2020
MATLAB
sacred.audio stage 1: analysis & reporting
Updated
Jul 31, 2020
JavaScript
Tool kit for exploratory data analysis and usage of SwipesForScience JSON data, complete with anonymous sample data.
Updated
Jun 18, 2020
Jupyter Notebook
CoalQC:Quality assessment of genomic datasets for Coalescent inferences
Updated
Feb 25, 2020
Shell
DiRoots - Connecting the dots!
Updated
Nov 25, 2019
Nextflow
Updated
May 30, 2018
Shell
Script for greedily remove related samples
Implementation of qunatum clustering and hierarchical quantum clustering
Updated
Aug 15, 2017
MATLAB
ALM REST API Integration in ruby.
Base framework for creating semantic QC dashboards
Updated
Jul 3, 2020
Python
Checking the status of the CTD Reference database (RDB)
Updated
Aug 20, 2020
MATLAB
A workflow designed to clean fastq files for the SEACONNECT project
Updated
Aug 21, 2019
Python
This is the github repository for the Eichler lab Amazon Web Services (AWS) pipelines
Updated
Jan 17, 2017
Perl
Estimate tumor enrichment from methylation array data.
Updated
Sep 18, 2018
Jupyter Notebook
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